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Using Vector NTI sequence files with MacVector Reverse polarity rv.
You have several options available for opening VectorNTI sequences in MacVector.
Directly accessing the Vector NTI database.
Vector Nti For Mac
Vector NTI is a Shareware software in the category Miscellaneous developed by Invitrogen Corporation. The latest version of Vector NTI is 10.3.0, released on. It was initially added to our database on. Vector NTI runs on the following operating systems: Windows. Vector NTI has not been rated by our users yet.
Vector NTI is a commercial bioinformatics software package used by many life scientists to work, among other things, with nucleic acids and proteins in silico.Itallows researchers to, for example, plan a experiment on the computer before actually performing it in the lab.
If you are using MacVector 10.6 or above then there is a function that allows you to directly import sequence data from databases created by Vector NTI Advance v10 or earlier. You can download a fully functional 30 day trial version of MacVector 10.6 to test this functionality. We are currently running a promotion where you can get a significant discount upgrading to MacVector 10.6, even if you were previously using the free academic version of Vector NTI.
- Select the Database->Vector NTI Import… menu item and then click on the Choose button to locate the Vector NTI database folder on your file system.
If the database resides on a Windows machine then make sure to share the parental directory containing the Vector NTI Database folder on the remote machine, then connect to that machine using the Finder Go->Connect to Server… menu item.
- Once a database has been selected, MacVector will display a list of all of the sequences available in the database. There is a popup menu to toggle between Nucleic Acid and Protein sequences. The list can be sorted to more easily identify sequence(s) of interest. Select one or more sequences and then click either the To Desktop button to open those sequences in MacVector, or To Disk to save the sequences in MacVector format to a folder on your hard drive.
MacVector will read all of the standard features and annotations associated with each sequence. Currently, feature appearance information is discarded and the default MacVector feature representations are used instead. In addition, MacVector ignores any restriction enzyme sites annotated in the database sequence and replaces them with the default dynamic set of sites used by the Map tab. However, all sequence features and related information are preserved. MacVector follows the Genbank format for the features table and is always kept up to date with the latest Genbank release, so where possible MacVector will also migrate any old and deprecated features information contained in the VectorNTI file into the current up to date features nomenclature.
Using the Vector NTI 'Save as File' ('Export') option
If you are using aversion of MacVector earlier than 10.6, or if you prefer to export your files from Vector NTI first, then you can export (Save As) your sequence files from Vector NTI then open them in MacVector. By default, Vector NTI saves nucleic acid sequences in GenBank format and protein sequences in GenPept format when the File->Save As->Save As File option is used to save individual sequence files (an alternate approach is the File->Molecule Operations->Export option). Other text file format output options include EMBL (nucleic acid only), SWISS-PROT (protein only), and FASTA (nucleic acid or protein), all of which can be read by any version of MacVector. An easy way to export a Vector NTI database molecule to an external file is to select it in the Vector NTI explorer and drag it to the Windows desktop or to a Windows folder. By default, nucleic acid sequences are converted into GenBank text file format while protein sequences are converted into GenPept text file format.
It's also possible to export sequences from the Vector NTI Explorer by right-clicking on the desired molecule and selecting Export->Molecule into Text File, and then selecting the desired format. Alternatively, you can use the File->Export menu item.
Another option is to export an entire Vector NTI database as individual GenBank format files. You can do this by opening the Vector NTI Explorer, selecting the type of molecules to export (i.e., DNA/RNA Molecules), then clicking Table->Export->Subset into Directory of Text Files.
ThermoFisher (owners of Invitrogen) have announced that Vector NTI Express is nearing the end of its life and Vector NTI Advanced was terminated quite some time ago. If you are looking for an easy to use sequence analysis application, then look for a reliable and trusted application. MacVector is easy to use, has a comprehensive set of tools and is definitely not going away! MacVector has been the tried and trusted sequence analysis application on the Mac for over 20 years. There are many thousands of happy molecular biologists using MacVector in labs all over the world. Don’t take our word for it, read what our users have to say. What’s more opening Vector NTI files is straightforward.
If you are using Vector NTI Advance 11 or Vector NTI Express
Download the Mac or Windows Vector NTI Data Export Tool from ThermoFisher’s website.
Run this and migrate your entire sequence database to Genbank format. Note that if you are running macOS Catalina, then Apple’s increased security means you will need to right click, choose Open, then Open again.
To open in MacVector simply double click the Genbank file to open it directly within MacVector.
When you make changes then save and MacVector will automatically migrate the data into MacVector’s own NUCL format.
You can optionally batch process all your files into MacVector format using an Applescript that is supplied within the MacVector application folder.
If you are using Vector NTI Advance 10 or earlier
Open MacVector
Select the Database->Vector NTI Import… menu item
Vector Nti Suite For Mac Download
Click on the Choose button to locate the Vector NTI database folder on your Mac.
MacVector will display a list of all of the sequences available in the database. There is a popup menu to toggle between Nucleic Acid and Protein sequences. The list can be sorted to more easily identify sequence(s) of interest.
Select one or more sequences and then click either the To Desktop button to open those sequences in MacVector, or To Disk to save the sequences in MacVector format to a folder on your hard drive.
Sequence annotation
MacVector will read all of the standard features and annotations associated with each sequence. Graphical appearance information is discarded and the highly customizable MacVector graphical features are used instead. If you prefer your sequences to look different then it is easy to curate all graphical features using MacVector’s Auto Annotation tool.
MacVector ignores any restriction enzyme sites annotated in the database sequence and replaces them with the default dynamic set of sites used by MacVector’s RE Picker. However, all sequence features and related information are preserved. MacVector follows the Genbank format for the features table and is always kept up to date with the latest Genbank release, so where possible MacVector will also migrate any old and deprecated features information contained in the VectorNTI file into the current up to date features nomenclature.
Vector Nti Download
You will always get a good discount for upgrading to MacVector from Vector NTI.
Vector Nti 11
Your sequences remain yours
The MacVector team strongly believe that you should never be locked out of your data. Your data is yours! Even if you have no license of MacVector then you can download MacVector Free and export your data. All versions of MacVector, including MacVector Free, have the tools to migrate sequences in Genbank format.